ORCHIDOMICS or how to understand orchids

Principal Investigator :
Prof. Marc-André Selosse
University of Gdansk

Panel: NZ8

Funding scheme : MAESTRO 7
announced on 15th June 2015

Since I was 12, I have had a passion for mushrooms and I spent all my free time in fields and forests, picking mushrooms and identifying them. As a student, I decided to shift to something more functional, dealing with fungal ecology and physiology: I developed a fascination for the mycorrhizal association. This symbiosis links the roots of 90% of land plants with soil fungi. One fascinating aspect is the weaving of the two partners into a dual organ, the mycorrhiza, made of living roots colonized by microscopic fungal filaments. A second one is the interwoven partners’ physiology: usually, the plant gives sugars issuing from its photosynthesis, while the fungus provides water and mineral nutrients collected in the soil. Moreover, this association protects both partners against pathogens and toxic soil compounds – so that neither can develop well without this symbiosis. As a mycologist, I am very interested in seeing how fungi help plants!

At the University of Gdansk, I joined a stimulating community of botanists. Together we built a research program using the latest research tools available – transcriptomics, molecular barcoding, isotopic chemistry, metabolomics – to better understand the functioning and diversification of the mycorrhizal symbiosis in realistic ecological and evolutionary frameworks. Most orchids rely on fungi for their mineral nutrition, as do most other plants. But excitingly, some orchids species that are not photosynthetic derive all their nutrients, including sugars, from their mycorrhizal fungi (mycoheterothophic plants). Some green orchids even combine both trophic strategies (mixotrophic plants). Orchids are therefore a good model to study the various roles of fungi in plant nutrition.

Thanks to the National Science Center that funded our ORCHIDOMICS project in MAESTRO7, we are currently building an international network of collaborators, linking mycologists and plant specialists who, within the newly established Laboratory of Plant Symbioses at University of Gdansk, will study the mycorrhizal relationship between fungi and plants, especially orchids.

Project title: ORCHIDOMICS – Understanding the metabolism of orchids in their environments: omics methods for adaptations and symbioses in orchids

Prof. Marc-André Selosse

Kierownik - dodatkowe informacje

Born in Paris in 1968. He is professor at the University of Gdansk (Department of Plant Taxonomy and Nature Conservation), at Muséum national d’Histoire naturelle (Paris, France) and invited professor at University of Viçosa (Brazil). He earned his PhD (1998) and Habilitation (2002) at Université Paris-Orsay. His research focuses on the ecology and evolution of mycorrhizas, a major symbiosis between soil fungi and plants roots, with a focus on orchids’ mycorrhizal fungi and on the fungal taxa Sebacinales, Laccaria and Tuber (truffles). He has published over 130 research papers. More specifically, his team has an interest in fungal populations and communities, with a specific focus on mycorrhizal networks, and in plant nutrition physiology. His team works on both temperate and tropical models. At Gdansk University, he leads the Laboratory of Plant Symbioses (LAPS). He teaches biological interactions, ecology and evolution at various French, Brazilian, Polish and Portuguese universities. His principal teaching duties are at the Ecole Normale Supérieure of Paris and Lyon. He is also involved in teaching future high-school teachers. The president of the Société Botanique de France since 2010 and member of the French Academy of Agriculture, he is editor for the scientific journals Symbiosis, New Phytologist and Botany Letters. He is very active in popular science and his many outreach essays are freely available online.

Prof. Marc-André Selosse

Polish researchers awarded in the JPIAMR call: Transmission Dynamics

Fri, 11/18/2016 - 13:32

We are pleased to announce that the EMerGE-NeT project involving researchers from Poland has been awarded funding within the JPIAMR call for proposals.  Polish team led by dr hab. Monika Joanna Piotrowska from the University of Warsaw together with prof. Aleksander Deptuła from Ludwik Rydygier Collegium Medicum in Bydgoszcz, will cooperate with researchers from Germany, Israel, the Netherlands and Spain.

The third JPIAMR call “To unravel the dynamics of transmission and selection of antimicrobial resistance (AMR) at genetic, bacterial, animal, human, societal, and environmental levels, in order to design and evaluate preventive and intervening measures for controlling resistance”, published in 2016, has awarded 28.3 M EUR to 19 research projects to bridge the knowledge gap on AMR transmission mechanisms. New JPI AMR call “Prevention and Intervention Strategies to control AMR infections” will be launched in January 2017.

JPIAMR is also supporting the WHO World Antibiotic Awareness Week and is also an active partner in the ECDC European Antibiotic Awareness Day November 18th.

Projects recommended for funding in this call:

STUDIES ON HUMAN TRANSMISSION

Acronym Title coordinator Affiliation Countries
BEAT-AMR Partnership against Biofilm-associated Expression, Acquisition and Transmission of AMR Hans-Jörg Kunte Federal Institute for Material Sciences and Testing (BAM), Berlin, Germany DE, CH, NL, UK
COLLATERALDAMAGE Using collateral sensitivity to reverse the selection and transmission of antibiotic resistance Pål Jarle Johnsen UIT- The Arctic University of Norway, Tromsø, Norway NO, NL, SE, DK
EMerGE-NeT Effectiveness of infection control against intra- and inter-hospital transmission of MultidruG-resistant Enterobacteriaceae – insights from a multi-level mathematical NeTwork model Rafael Mikolajczyk Helmholtz Centre for Infection Research, Braunschweig, Germany DE, IL, NL, PL, ES
MODERN Understanding and modelling reservoirs, vehicles and transmission of ESBL-producing Enterobacteriaceae in the community and long term care facilities Jesus Rodríguez-Baño Servicio Andaluz de Salud, Hospital Universitario Virgen Macarena (FISEVI), Sevilla, Spain ES, CH, UK, FR, DE, NL
PNEUMO-SPREAD Mechanisms for acquisition and transmission of successful antibiotic resistant pneumococcal clones pre- and post-vaccination Birgitta Henriques-Normark Karolinska Institutet and Karolinska University Hospital, Stockholm, Sweden SE, DE, UK
Restrict-Pneumo-AMR Prevention and Restriction of Antimicrobial Resistance in Pneumococci by Multi-level Modelling Stephen Bentley Wellcome Trust Sanger Institute, Cambridge, UK UK, CA, DE, NL
TransPred Predicting cell-cell horizontal transmission of antibiotics resistance from genome and phenome Jonas Warringer University of Gothenburg, Gothenburg, Sweden SE, FR, UK, BE

STUDIES OF ONE HEALTH TRANSMISSION

Acronym Title Coordinator Affiliation Countries
HECTOR The impact of Host restriction of Escherichia coli on Transmission dynamics and spread of antimicrobial Resistance Constance Schultsz Academic Medical Center, University of Amsterdam, Amsterdam, Netherlands NL, ES, DE, UK
JumpAR A multi-scale approach to understanding the mechanisms of mobile DNA driven antimicrobial resistance transmission Orsolya Barabas EMBL, Heidelberg, Germany DE, SE, CA
MACOTRA

Combating MRSA; increasing our understanding of transmission success will lead to better control of MRSA

Margreet Vos Erasmus University Medical Center, Rotterdam, Netherlands NL, FR, UK
PET-Risk Risk of companion animal to human transmission of antimicrobial resistance during different types of animal infection Constança Ferreira Pomba Faculty of Veterinary Medicine, University of Lisbon, Lisbon, Portugal PT, DE, CA, UK, CH
PREPARE Predicting the persistence of resistance across environments Alex Wong Carleton University, Ottawa, Canada CA, PT, DK
SpARK The rates and routes of transmission of multidrug resistant Klebsiella clones and genes into the clinic from environmental sources Edward Feil University of Bath, Bath, UK UK, IT, Fr, NO
ST131_ transmission Escherichia coli ST131: a model for high-risk transmission dynamics of antimicrobial resistance Johann Pitout University of Calgary, Calgary, Canada CA, FR, ES, CH, UK
STARCS Selection and Transmission of Antimicrobial Resistance in Complex Systems Willem van Schaik University Medical Center Utrecht, Utrecht, Netherlands NL, SE, ES, FR, UK, BE
TransComp-ESC-R Genomic approach to transmission and compartmentalization of extended-spectrum cephalosporin resistance in Enterobacteriaceae from animals and humans Patrick Boerlin University of Guelph, Ontario Veterinary College, Guelph, Canada CA, FR, DE, UK

STUDIES ENVIRONMENTAL TRANSMISSION

Acronym Title Coordinator Affiliation Countries
AWARE-WWTP Antibiotic Resistance in Wastewater: Transmission Risks for Employees and Residents around Waste Water Treatment Plants Ana De Roda Husman RIVM, Bilthoven, Netherlands NL, SE, DE, RO
DARWIN Dynamics of Antimicrobial Resistance in the Urban Water Cycle in Europe Barth F Smets Technical University of Denmark, Lyngby, Denmark DK, UK, ES, IL
Gene-gas Wastewater treatment plants as critical reservoirs for resistance genes Rolf Lood Lund University, Lund, Sweden SE, DK, NO

Contact

Jerzy Frączek, jerzy.fraczek@ncn.gov.pl, tel. +48 12 341 90165

Malwina Gębalska, malwina.gebalska@ncn.gov.pl, tel. +48 12 341 9017

NCN to contribute nearly € 120 million to basic research

Thu, 11/17/2016 - 12:33

The National Science Centre has concluded the eleventh edition of the OPUS, SONATA and PRELUDIUM programmes and the second edition of the POLONEZ funding opportunity. 1090 projects have received funding. The total sum given to researchers exceeds € 118 million.

OPUS, SONATA and PRELUDIUM form the mainstay of the National Science Centre’s offer of funding opportunities, aimed at a large community of researchers pursuing basic research. Launched twice yearly, the calls have invariably enjoyed the biggest response from the research community. It was no different this time, with a total number of 3,783 entries.

­Again we have seen an increase in the success rate, i.e. the ratio of proposals qualified for funding to the proposals submitted. This time, in OPUS, SONATA and PRELUDIUM, it has reached 28%, which shows a 4% improvement in comparison to the previous edition, said professor Zbigniew Błocki, director of the Centre. This is one effect of the € 26 million increase in the Centre’s budget, and – most of all – of the plans to raise it by another € 36 million in 2017. We hope that this trend will continue, so that we will be able to reach a 30% success rate. Such a proportion allows for the financing of even more research projects  while also sustaining the high quality of  the awarded works and the competitive nature of the process.

The OPUS call welcomes entries from all researchers, notwithstanding their years of experience and degrees earned. The funding received in the call can serve a number of uses: it may be spent on launching a research team, but also on the purchase of research equipment needed in the procedure. It is, therefore only natural that OPUS should be the most popular NCN programme. Its eleventh edition has seen as many as 1,830 proposals, of which 500 have been granted funding totalling more than € 83 million.

SONATA is a call for projects carried out by researchers with a doctorate degree held for up to 7 years. Funding in this programme presents researchers at the beginning of their career with an opportunity to carry out innovative research, using state-of-the-art technology or an original methodology. In the present deal, 757 projects have been submitted, of which 204 have been awarded. The call’s budget has been set at just under € 21 million.

The PRELUDIUM call is specifically dedicated to persons at the earliest stage of their researcher pursuits and those who hold no doctorate. It sees entries predominantly from PhD candidates, since the programme gives this group of scholars the opportunity to independently lead a research project. There have been 1,196 registered submissions, and funding has been granted to 360 projects worth a total of more than € 9.2 million.

The final programme among the concluded funding opportunities has a different agenda. POLONEZ is addressed to incoming researchers seeking the opportunity to do research in Poland. Laureates of the programme will be granted resources that will enable them to carry out research and move to Poland with their families, as well as participate in training to develop various skills. In the second, penultimate edition, the Centre has received applications from 319 researchers, of whom 26 will have the opportunity to work in Polish host institutions. The budget of the scheme exceeds € 5 million.

NCN calls are open to representatives of all research disciplines. In the present edition the highest funding (€ 279,127) in the domain of Arts, Humanities and Social Sciences has been granted to dr hab. Marcin Szwed of Jagiellonian University, laureate of the National Science Centre 2016 Award. In his project his Krakow-based team of psychologists will study the cerebral representation of numbers in people reading both Arabic and Braille numerals. In the area of Life Sciences the largest funding (€ 525,498) has gone to the team led by professor Jan Potempa, also of Jagiellonian University, working on the project titled “Structure and function characterisation of newly discovered unique inhibitors of proteases.” Among the representatives of Physical Sciences and Engineering, the most generous grant of € 451,196 will go to prof. dr hab. eng. Paweł Gryboś of AGH University of Science and Technology in Krakow. The professor and his co-investigators will study “Application specific integrated circuit of colour digital imaging working with high X-ray radiation intensity.” All three projects have been submitted under the OPUS 11 call.

Ranking lists of the projects qualified for funding in the OPUS 11, SONATA 11, PRELUDIUM 11 and POLONEZ 2 programmes can be accessed on the National Science Centre’s webpage.

Member of the NCN Council to receive Poland-U.S. Science Award

Thu, 11/03/2016 - 09:15

We are pleased to announce that professor Ryszard Kierzek from the Institute of Bioorganic Chemistry of the Polish Academy of Sciences, member of the Council of the National Science Centre, and professor Douglas H. Turner from the University of Rochester have received the Poland-U.S. Science Award. The award is conferred jointly by the Foundation for Polish Science (FNP) and the American Association for the Advancement of Science (AAAS) for outstanding scientific achievements accomplished in American-Polish scientific cooperation.Professors Kierzek and Turner have been rewarded for their collaboration in research into thermodynamics, biology and structure of ribonucleic acid (RNA). Thanks to their research it has become possible to predict the structure of any RNA based on its sequence. The researchers have also determined thermodynamic rules of RNA folding, currently in use among most research teams active in this research area. Their research on RNA is also related to learning the development mechanisms of certain human diseases. For several years, they have worked on the use of modified oligonucleotides for the modulation of biological activity of pathogenic RNAs, including inhibition of replication of the influenza virus.

The Poland-U.S. Science Award was established in 2013. It is granted once every two years by way of a nomination-based competition. The winners are chosen by a jury of eminent scientists from Poland and the United States. This has been the second edition of the Award.

New CHIST-ERA call is now open

Fri, 10/28/2016 - 15:02

The National Science Centre and the CHIST-ERA consortium invite researchers to a new edition of the call for international research projects. Topics of the 2016 opportunity are:

  • Lifelong Learning for Intelligent Systems (LLIS)
  • Visual Analytics for Decision Making under Uncertainty (VADMU)

Proposals must be submitted by research groups composed of at least 3 partners from 3 different countries participating in the CHIST-ERA call.

Project duration: 24 or 36 months

Call deadline: 17th of January 2017, 17.00 CET

Call results: July 2017

Call documentation :

You are also invited to use Partner Search Tool, a development facilitating matches between potential partners with similar ideas.

For detailed information on the call, go to: http://www.chistera.eu/call-2016-announcement.

Information for polish applicants:

  1. Polish applicants must register their applications in the OSF submission system (UNISONO application, please see Annex to NCN Council’s Resolution no. 56/2016). This application includes the following budget table.
  2. Budget of the Polish part of the research project in the OSF system should be given in PLN (1 EUR= 4,3122 PLN). 
  3. We strongly encourage all applicants to read information on eligible costs included in the Annex to NCN Council’s Resolution on funding granted within calls for proposals for international research projects (UNISONO, p. 6-13).
  4. If one international project includes partners from two different Polish Host Institutions, these institutions must apply as a consortium (please see also UNISONO – p. 2: IV, § 8 and p. 9:  footnote 16). Each Host Institution comprising the consortium has a separate budget, but the limit on the remuneration, referred to in paragraph 2.1. of the above mentioned document, applies to the consortium as a whole.
  5. We invite all researchers who plan to apply within the CHIST-ERA call to contact the NCN.

Contact:

Dr Jakub Gadek, jakub.gadek@ncn.gov.pl, tel. +48 12 341 9152

Sylwia Kostka, sylwia.kostka@ncn.gov.pl, tel. +48 12 341 9018

 

Planets of other suns

Principal Investigator :
Prof. Andrzej Niedzielski
Nicolaus Copernicus University in Toruń

Panel: ST9

Funding scheme : OPUS 4
announced on 15th September 2012

What is the future of the Solar System? How long can we stay on our planet and where should we move to when it turns out that move we must? Answers to questions of this kind, once belonging mostly in the domain of science fiction, nowadays are offered by research projects committed to the search and study of other stars’ planets.

Since the discovery of the first extrasolar planetary system by A. Wolszczan & D.A. Frail in 1992, more than two thousand planets orbiting other stars have been found. The Penn-State-Toruń Planet Search (PTPS) started in 2007, an initiative of Pennsylvania State University’s professor Aleksander Wolszczan, who collaborated with professor Andrzej Niedzielski of Nicolaus Copernicus University. Initially the project was based solely on observations of stars carried out with the 9.2 m Hobby-Eberly Telescope in Texas. Currently the project also uses other telescopes, which allow for exact measurements of changes in the speed of about one thousand stars. PTPS is one of the largest projects of searching for planets in the proximity of stars older or larger than the Sun.

The aim of PTPS is to observe and study a number of new planetary systems that already show the impact of their hosting star’s evolutionary changes. This research will help explain how a star’s evolution affects its orbiting planets. The project draws on state-of-the-art observations using some of the world’s largest telescopes, such as the Hobby-Eberly Telescope in Texas and the Telescopio Nazionale Galileo on the Canaries. The material collected through the observations – high-definition stellar spectra – is used for detection of new extrasolar planets and for detailed analysis of their hosting stars.

Apart from describing new planets and their orbits, particularly interesting are all kinds of anomalies in the stars under investigation that might point to past disturbances of a planetary system in the wake of changes inside an aging star. Such singularities may take place in the chemical make-up of stars, their rotation periods, and they can also manifest as planets’ odd orbits. It was in the BD+48 740 star’s planetary system that for the first time traces were found of a past catastrophe where one of the planets was engulfed by a star. Next to HD 219415 and BD+49 828, planets similar to Jupiter were located, with very distant orbits of 5.7 and 7.1 year periods. In the planetary system of the TYC 3667-1280-1 star – its mass almost twice and its bulk six times that of the Sun – an extremely rare Jupiter-like planet was found, on an orbit twice that of Mercury’s. Since PTPS’s inception, over 20 planetary systems have been discovered, including 3 comprising two planets.

The research has its continuation in the project titled Planets of other suns (OPUS 10). Using a number of European telescopes, thorough examination will be given to planet candidates as well as very rare brown dwarfs (“failed stars”). An analysis will be presented of about a dozen stars overabundant in lithium, an element which should not be present in these stars; the relation of this chemical singularity with planets will also be investigated.

Project title: The PennState-Toruń Planet Search for planets around evolved stars

Prof. Andrzej Niedzielski

Kierownik - dodatkowe informacje

Astrophysicist, director of the Chair of Astronomy and Astrophysics, Toruń Centre for Astronomy, Nicolaus Copernicus University. Since his doctoral dissertation (NCU, 1992), his research interests have been focused on stellar spectroscopy. Since 2007 he has been the principal investigator of PTPS, a project which, apart from discovering dozens of planetary systems, has resulted in a number of doctorate dissertations and scholarly papers describing the specific qualities of the stars from the project’s sample.

Prof. Andrzej Niedzielski

Polish Info Days in London and Glasgow

Mon, 10/24/2016 - 11:03

We are pleased to invite representatives of research institutions as well as researchers willing to conduct research in Poland to information meetings organised in Glasgow, on the 4th November, and London – on the 5th November. During these meetings representatives of all the main research funding institutions in Poland: the National Science Centre, the Foundation for Polish Science and the National Centre for Research and Development will present their research funding portfolio.

More information:

Polish Info Days in Glasgow

Polish info Days in London

Contact:

Agnieszka Kossakowska, agnieszka.kossakowska@fnp.org.pl

POLONEZ 3 – presentation

Mon, 10/17/2016 - 14:57

We would like to inform that the presentation regarding POLONEZ 3 is already available.

Please see it here.

Contact:

Beata Krasnopolska, tel. 12 341 9091

Agata Mendrek, tel. 12 341 9139

polonez@ncn.gov.pl

Pain therapy, brain plasticity and automata theory: winners of the National Science Centre 2016 Award announced

Fri, 10/14/2016 - 16:09

Dr hab. Marcin Szwed, dr hab. Katarzyna Starowicz-Bubak and prof. dr hab. Mikołaj Bojańczyk are the laureates of the National Science Centre 2016 Award.  Each scholar will receive the equivalent of nearly €12,000 in recognition of their accomplishments in basic research.The National Science Centre Award was established as a means of promoting young researchers: laureates are chosen from amongst researchers under 40. The award is conferred for outstanding achievements in basic research, i.e. experimental or theoretical endeavours made with a view towards gaining new knowledge, which are not directly commercial application-oriented. The selection of the winners included authors of research projects carried out in Polish research centres, documented with publications.

In the field of Arts, Humanities and Social Sciences, the award was granted to dr hab. Marcin Szwed from the Institute of Psychology, Jagiellonian University, for large-scale research on the plasticity of the human brain in people with impaired eyesight and hearing. The team he coordinates has been successful in disproving some long-standing theses on the division of the brain into separate sense-related parts. The award is sponsored by Grupa Azoty S.A.

I’m grateful to the NCN for awarding me “the scientific Nike” [Poland’s most prestigious literary award] , because this proves that you can come back to Poland and still be able to carry out great science, said dr hab. Szwed. This award comes also as deserved recognition for the team of fantastic people I’m honoured to be working with.

The laureate of the award in Life Sciences is dr hab. Katarzyna Starowicz-Bubak from the Institute of Pharmacology of the Polish Academy of Sciences. Among her outstanding achievements is her discovery of the role of the endocannabinoid system in the development and treatment of chronic pain; she has also developed a new pharmacological approach to the therapy of osteoarthtosis-related pain. Her award is sponsored by Biprostal S.A. and Koksoprojekt BIS Sp. z o.o.

This award confirms the significance of my research, which is the successful treatment of pain. It in a way crowns my achievements in this matter, but it also gives me the impulse to do further work, to improve the effectiveness of analgesic procedures in treating patients with chronic pain syndromes, said dr hab. Starowicz-Bubak.

The third laureate of the NCN 2016 Award, in the field of Physical Sciences and Technology, is professor dr hab. Mikołaj Bojańczyk from the Institute of Informatics, University of Warsaw. The award committee has recognised his outstanding contribution to automata theory and logic. The award is sponsored by EDF Polska S.A.

I feel honoured to receive the NCN Award. I consider it a gesture of acknowledgment to a larger community of researchers in Poland who work on the basics of informatics. I believe that this is one of the strengths of Poland’s science, and our researchers can freely compete with their colleagues in the best centres around the world, said professor Bojańczyk.

The National Science Centre Award is conferred by a committee comprising representatives of the Council of the National Science Centre, the Director of the Centre and sponsors. The three winners have been selected out of 49 candidates submitted by eminent scholars. Each person could name only one candidate. Some researchers received multiple nominations.

The award gala took place on 12th October 2016 at the Gallery of 19th Century Polish Art – the Sukiennice. The sponsors’ representatives gave the laureates memorial statuettes. The ceremony host was Grażyna Torbicka and the event was accompanied by an accordion concert from Weronika Sura.